الخميس، 21 أبريل 2011

Genes from algae allow blind mice to see

Need for genes? (Image: Eye of Science/SPL) 
 
 
BLIND people could one day have their sight restored thanks to a treatment that borrows a gene from an unlikely source - algae - and inserts it into the retina. The technique has succeeded in restoring the ability to sense light and dark to blind mice, and clinical trials in humans could begin in as little as two years.
"The idea is to develop a treatment for blindness," says Alan Horsager, a neuroscientist at the Institute of Genetic Medicine at the University of Southern California, Los Angeles, who leads the research. "We introduce a gene that encodes a light-sensitive protein, and we target the expression of that gene to a subset of retinal cells."
Some 15 million people worldwide have some form of blindness, such as retinitis pigmentosa (RP) or age-related macular degeneration (AMD). In people with these conditions the photoreceptors, which transform light hitting the eye into electrical impulses, are damaged, preventing the brain from receiving image information.
As the global population ages, it is thought that the number of people affected will increase. There are experimental attempts to develop electronic implantsMovie Camera and to use stem cells to grow new retinal tissues to restore sight, but there is currently no commercial treatment available.
Horsager hopes his work will change that. His team's approach is based on gene therapy, where a "tame" virus is harnessed to transfer a gene into target cells in the recipient. In this case the gene of interest is one that makes Channelrhodopsin-2 (ChR2), a photosensitive protein used by unicellular algae to help them move towards light. The target cells are bipolar cells in the retina.
The retina contains three cellular layers that work together to detect and transmit light signals to the brain (see diagram). The first layer contains the photoreceptors - the rods and cones that detect light. The second layer is made of bipolar cells that act as a conduit between the photoreceptor and the third type of cell, the ganglion, which transmits the light signals to the brain.
In people with RP and AMD, the photoreceptors have been damaged and lost, so the ganglion cells do not receive signals and the brain cannot produce an image. The idea behind the gene therapy is to make the bipolar cells function as photoreceptors by producing ChR2. The modified bipolar cell would then be able to sense light and transmit a signal to the ganglion.
Horsager's team tested their technique using three groups of mice: one with normal vision, and two groups of mouse strains that naturally become blind with age in a similar way to people with RP and AMD. One blind group was treated with the gene therapy, while the other two groups were not.
Treated mice received a sub-retinal injection of the virus containing the algal gene. Ten weeks after the injection, the team dissected some of the mice and used immunolabelling to see whether ChR2 was being expressed in the retina. They found that the protein was being made by the bipolar cells.
But the strongest evidence of the treatment's success came when treated mice were put in the centre of a water maze with six possible corridors, only one of which led to a ledge that the mice could clamber out of the water onto. With a guiding light shining at the end of the corridor which contained the ledge, the gene-therapy mice were able to find the escape platform 2.5 times faster, on average, than the untreated blind mice. The work will appear in Molecular Therapy.
Repeating the test 10 months later, the team found that the treated mice were still showing significant improvements in vision compared with the untreated blind mice. "Our expectation is that this would be a one-time treatment that is permanent or semi-permanent," says Horsager.
Concerns have been raised about the safety of gene therapy in the past, not least about links between the viruses used to transfer the genes and disease. Horsager says the algal genes were only expressed in the target cells, and that there is no evidence of an immune response in the mice, suggesting that the transfer of the foreign gene has been restricted to the bipolar cells.
However, small amounts of ChR2 DNA were found in other tissues. "Regulatory agencies would be very concerned that ChR2 DNA was found in tissues outside of the treated eye," says Robert Lanza, of Advanced Cell Technology in Worcester, Massachusetts. Horsager's team believe the rogue DNA is due to cross-contamination during the analysis process.
"It's a good paper, and it's clear that they are heading towards a clinical trial with the information they are gathering," says Pete Coffey of the department of ophthalmology at University College London. But he points out that although there is a statistical difference between the performance of the treated and untreated mice, that difference is small.


http://www.newscientist.com/article/mg21028083.100-genes-from-algae-allow-blind-mice-to-see.html
 

Covert hard drive fragmentation embeds a spy's secrets


You'll have to try harder than that (Image: Ryan McVay/Getty)


GOOD news for spies. There is now a way to hide data on a hard drive without using encryption. Instead of using a cipher to scramble text, the method involves manipulating the location of data fragments.
The inventors say their method makes it possible to encode a 20-megabyte message on a 160-gigabyte portable hard drive. It hides data so well that its existence would be "unreasonably complex" to detect, they say.
Encryption should sometimes be avoided, says Hassan Khan at the University of Southern California in Los Angeles, because the gobbledegook it creates is a dead giveaway: it shows someone might have something to hide. That could spell disaster for someone trying to smuggle information out of a repressive country.
So "steganography", hiding data in plain sight, is coming to the fore. Normally, data intended to be secret is added to the pixels in digital images, or used to change the transmission timing of internet packets. But these techniques are well known and easily detected, says Khan. So, with colleagues at the National University of Science and Technology in Islamabad, Pakistan, he has developed an alternative.
Their technique exploits the way hard drives store file data in numerous small chunks, called clusters. The operating system stores these clusters all over the disc, wherever there is free space between fragments of other files.
Khan and his colleagues have written software that ensures clusters of a file, rather than being positioned at the whim of the disc drive controller chip, as is usually the case, are positioned according to a code. All the person at the other end needs to know is which file's cluster positions have been encoded.
The code depends on whether sequential clusters in a file are situated adjacent to each other on the hard disc or not. If they are adjacent, this corresponds to a binary 1 in the secret message. If sequential clusters are stored in different places on the disc, this encodes a binary 0 (Computers and Security, DOI: 10.1016/j.cose.2010.10.005). The recipient then uses the same software to tell them the file's cluster positions, and hence the message. The researchers intend to make their software open source.
"An investigator can't tell the cluster fragmentation pattern is intentional- it looks like what you'd get after addition and deletion of files over time," says Khan. Tests show the technique works, as long as none of the files on the hard disc are modified before handover.
"The real strength of this technique is that even a completely full drive can still have secret data added to it – simply by rearranging the clusters," adds Khan.
Others are impressed with the technique but see limitations.
"This type of steganography could be used by spies, police or informants - but the risk is that it requires direct contact to physically exchange the USB device containing the secret data," says Wojciech Mazurcyk, a steganographer at Warsaw University of Technology in Poland. "So it lacks the flexibility of internet steganography. Once you embed the secret data on the disk it is not easy to modify it."
But won't making the covert hard disk software open source – as the group plans - encourage its use by criminals and terror groups?
"It's how security vulnerability disclosure works," says Khan. "We have identified that this is possible. Now security agencies can devise techniques to detect it." He adds that his team have had no issues with either US or Pakistani security agencies over their development of this secret medium - despite current political tensions between the two nations.
"The use of steganographic techniques like this is likely to increase," says Fred Piper, director of information security at Royal Holloway, University of London. "Eavesdroppers can learn much from the fact that somebody is encrypting a message."

http://www.newscientist.com/article/mg21028095.200-covert-hard-drive-fragmentation-embeds-a-spys-secrets.html

Forensic Anthropology

Forensic Anthropology

What is Forensic Anthropology?

 
"Forensic anthropology is the scientific discipline that applies the methods of physical anthropology and archeology to the collection and analysis of legal evidence.  Description and identification of skeletonized human remains are standard work for forensic anthropologists, but the expertise of the forensic anthropologist is also applicable to a wide variety of other problems.  The common denominator is hard tissues:  bones, teeth, and sometimes cartilage"  (Burns 1999:3).
Therefore, in order to practice forensic anthropologist, one must first and foremost study physical anthropology, with an emphasis on skeletal biology, and secondarily, train in archaeology in order to assist in the search for and excavation of skeletal material.  A physical anthropologist may also be asked to examine a body that is badly or completely decomposed or burned. It is the job of the anthropologist to identify whether or not the bones are human, and if they are human, to develop a biological profile, which will aid in the identification of the person(s). A biological profile consists of the person's ancestry, sex, age at the time of death, and stature, as well as any trauma sustained to the skeleton that may aid in the identification of the individual, or give indications of cause or manner of death.
Trauma
What is the difference between Cause of Death and Manner of Death?  

Cause of death
is the way in which someone died (or what caused his or her death). A few common examples are gunshot wound, stabbing, asphyxiation (strangulation), and being bludgeoned to death (usually referred to as blunt force trauma) Manner of death is classified as one of five types:  homicide, suicide, accidental, natural or unknown. 
Reference:
Burns, Karen Ramey
1999   Forensic Anthropology Training Manual.  Prentice-Hall, N.J.

How to become a Forensic Anthropologist?


If you want to become a forensic anthropologist, you have to go to university and study physical anthropology. Physical anthropology is one of four sub-disciplines of anthropology. Cultural anthropology, archaeology, and linguistics are the others. Physical anthropology encompasses  topics such as primatology, evolution, and skeletal biology, to name a few. So you have to go to university to get a degree in physical anthropology, and you should try and focus your studies on human osteology. From there, you must continue your education, because in order to practice as a forensic anthropologist, you need a minimum of a master's in physical anthropology with a lot of experience, or a PhD in physical anthropology. However it is possible to study specific aspects of physical anthropology at the master's level, such as skeletal biology. It is also possible to study forensic anthropology at the master's level.  There are no full time forensic anthropologists in Canada, so when skeletal remains are found, typically the police consult a physical anthropologist with a specialty in skeletal biology.  Almost all physical anthropologists in Canada teach at universities; others work in museums such as the Canadian Museum of Civilization in Ottawa (http://www.civilization.ca/).  Forensic anthropologists in Canada belong to the Canadian Association of Physical Anthropology (http://capa.fenali.net/)and, in many cases, to the Canadian Society of Forensic Sciences (http://www.csfs.ca/csfs_journal.aspx).  In the United States, the employment situation is similar.  However, there is also a professional organization to which physical anthropologists working in the forensic anthropology field can belong, the American Board of Forensic Anthropology  (www.csuchico.edu/anth/ABFA/).
Much of the work for forensic anthropologists today is in the area of human rights work with organizations like Physicians for Human Rights (http://physiciansforhumanrights.org/).  Another human rights organization is CIFA, the Center for International Forensic Assistance (www.cifa.ac/); it employs forensic scientists from all fields to do work when needed. Something like this would provide great field experience for an up-and-coming anthropologist. 




http://people.stu.ca/~mclaugh/specialties/forensic_anthropology.html


Anthropology Saluki Style

Anthropology Saluki Style

Here’s where I do my civic duty as an anthropology major and “talk up” the Anthro Department here at SIU. First and foremost, “talking up” the Anthropology department is probably not the best choice of words to start out my post largely because the SIU-C Anthropology doesn’t need talking up….it speaks for itself.

What is Anthropology?
“Anthropology is the study of humans and their cultures in the broadest sense. It is the study of humanity, past and present, in all its biological and cultural aspects. Anthropologists study the diversity, origins, and evolution of human and primate culture and behavior, the development of human culture and the processes of culture change, the phenomenon of language, and the structure and meaning of human interaction.”                                                                                                                   -Southern Illinois University- Carbondale, Department of Anthropology Website

Anthropology at SIU-C

The SIU-C Anthropology Department is divided up according to the four field holistic approach of American Anthropology- Linguistic, Biological (Physical), Socio-cultural, and Archaeology. Ourdepartment also offers several field schools where aspiring anthropologists can gain real-life experience conducting archaeological excavations hosted by professors and researchers, ethnographic field schools where students can gain experiences visiting and conducting research with another culture, and research opportunities with professors and other students here at the university.   **Quick note- SIU-C has the only Forensic Anthropology Minor in the state of Illinois!**
My Experiences as an Anthropology Major:

As an undergraduate I have taken a broad range of classes that have expanded not only my knowledge but my worldview and outlook on life. Courses in anthropology have challenged me to reaffirm my values and beliefs as well as expand my knowledge base of human origins, histories, behavior, and present day social constructs.
I hope to become a socio-cultural anthropologist studying religiosity in the military. Although SIU-C doesn’t have strong roots in socio-cultural anthropology its roots in biological anthropology and archaeology are above par. If you are looking for a major that will allow you to play in the dirt, play with the bones of primates…including humans, challenge your beliefs, and allow you to have a blast while doing it then anthropology is what you seek.
I began my SIU career as an Agriculture Education major but quickly found out I wasn’t in the right field. After taking the course America’s Diverse Cultures I knew that Anthropology was my fate. The course material was interesting, the instructor, a PhD student, was VERY knowledgeable and hooked my interest from day one; this course remains one of my favorites out of the over 190 credit hours I have taken as an undergraduate. Anthropology is not for everyone and for my career’s sake I hope not everyone chooses to be an anthropology major :-) BUT I hope that I have given you insight on what anthropology is and the caliber of the program we have here at SIU-C.

What is Anthropology?
“Anthropology is the study of humans and their cultures in the broadest sense. It is the study of humanity, past and present, in all its biological and cultural aspects. Anthropologists study the diversity, origins, and evolution of human and primate culture and behavior, the development of human culture and the processes of culture change, the phenomenon of language, and the structure and meaning of human interaction.”                                                                                                                   -Southern Illinois University- Carbondale, Department of Anthropology Website
Anthropology at SIU-C
The SIU-C Anthropology Department is divided up according to the four field holistic approach of American Anthropology- Linguistic, Biological (Physical), Socio-cultural, and Archaeology. Our department also offers several field schools where aspiring anthropologists can gain real-life experience conducting archaeological excavations hosted by professors and researchers, ethnographic field schools where students can gain experiences visiting and conducting research with another culture, and research opportunities with professors and other students here at the university.
My Experiences as an Anthropology Major:
As an undergraduate I have taken a broad range of classes that have expanded not only my knowledge but my worldview and outlook on life. Courses in anthropology have challenged me to reaffirm my values and beliefs as well as expand my knowledge base of human origins, histories, behavior, and present day social constructs.
I hope to become a socio-cultural anthropologist studying religiosity in the military. Although SIU-C doesn’t have strong roots in socio-cultural anthropology its roots in biological anthropology and archaeology are above par. If you are looking for a major that will allow you to play in the dirt, play with the bones of primates…including humans, challenge your beliefs, and allow you to have a blast while doing it then anthropology is what you seek.
I began my SIU career as an Agriculture Education major but quickly found out I wasn’t in the right field. After taking the course America’s Diverse Cultures I knew that Anthropology was my fate. The course material was interesting, the instructor, a PhD student, was VERY knowledgeable and hooked my interest from day one; this course remains one of my favorites out of the over 190 credit hours I have taken as an undergraduate. Anthropology is not for everyone and for my career’s sake I hope not everyone chooses to be an anthropology major :-) BUT I hope that I have given you insight on what anthropology is and the caliber of the program we have here at SIU-C.




http://anthony.siuc.edu/2011/03/anthropology-saluki-style/

Anthropology

Anthropology is a science of humankind. It studies all facets of society and culture. It studies tools, techniques, traditions, language, beliefs, kinships, values, social institutions, economic mechanisms, cravings for beauty and art, struggles for prestige. It describes the impact of humans on other humans. With the exception of the Physicial Anthropology discipline, Anthropology focuses on human characteristics generated and propogated by humans themselves.
Physical Anthropology studies anatomy and biology -- race, gender, adaptation. It studies humankind as a biology type, describing physical development over the millenia.
Linguistics studies the structures of language and historic relationships among them.
Ethnology studies human culture in a historic and comparative perspective. There is a subfield that concentrates on myth, music, and folklore to study human geography and human passage in time.
Applied Anthropology uses anthropological knowledge and expertise to deal with modern problems. For example, it aids in impact studies of technological innovations, public health schemes, or economic development patterns. Applied Physical Anthropology can be important in the design of work stations, cockpits, airplane seats.
It is our hope that the Web pages at this site lead you to projects and studies of humankind. There are pages which can lead you to reference material, academic departments, libraries, museums, publications, organizations, and other endeavors.

BlackBerry PlayBook teardown


BlackBerry PlayBook Teardown

With its BlackBerry PlayBook, Research in Motion joins the growing tablet market and sets its sights on the Apple iPad 2 and Motorola XOOM. TechRepublic's Jason Hiner was one hand at the PlayBook launch event and snagged one for us to test and crack open. Follow along as we take a peak at the hardware inside RIM's tablet.

Photo by: Bill Detwiler / TechRepublic
Caption by: Bill Detwiler

BlackBerry PlayBook Teardown - Image 1 of 80




With its BlackBerry PlayBook, Research in Motion joins the growing tablet market and sets its sights on the Apple iPad 2 and Motorola XOOM. TechRepublic's Jason Hiner was one hand at the PlayBook launch event and snagged one for us to test and crack open. Follow along as we take a peak at the hardware inside RIM's tablet.


http://www.techrepublic.com/photos/blackberry-playbook-teardown/6220365?tag=mantle_skin;landing

الأربعاء، 13 أبريل 2011

Elephant Information


 Picture of elephant

Trunk
The elephant's nose and upper lip are elongated into a muscular, powerful trunk. This truly multi-purpose tool is powerful enough to uproot trees but dextrous enough that the two 'fingers' at its tip can pick up single seeds. Elephants can swim considerable distances and, in deeper water, will use their trunks like snorkels.
Tusks
The tusks are elongated upper incisor teeth and are not necessarily the same size. Some adults lack tusks and some have only one. Bulls typically have thicker, heavier tusks than females. Elephants will often uproot trees and then use their tusks to chisel the bark off.
Eyes and Ears
An elephant's eyes are small relative to the huge size of the animal. The ears are very large, flat and roughly the shape of the African continent, often with tears and holes in them. The ears are laden with blood vessels and when flapped, help bring down the huge beast's body temperature.
Feet and Tail
The front feet are roughly circular, with five blunt toenails; the hind feet are oval, with four blunt toenails. The soles are padded, allowing amazingly silent movement for such a large amimal. The tail is thin, up to 1.5 m long, and has a whisk of long, thick hairs at the end.
Visible Male/Female Differences
Females have one pair of mammae, low on the sides of the chest, just behind the forelegs. Both sexes have a thick flap of skin hanging between their hind legs. Males are larger, taller and twice as heavy as cows. Bulls have wider heads and in profile they have a more rounded forehead.
Diet
Very unselective; when browsing acacias they swallow more wood than leaves. In summer, grass forms the bulk of the diet, replaced in winter by woody plants. Intake is about 150kg wet weight per day while water intake is 120 litres a day for an adult bull.
Reproduction
Single calves weighing 120kg are born throughout the year after a gestation of 22 months. Calves are weaned at 3-8 years, just before the birth of the next calf.
Sounds
Elephants are very vocal, producing a wide variety of squeals, screams and high-pitched trumpeting which are audible to humans. Seventy-five percent of the vocal communication uses frequencies too low for humans to hear.
Above information from The Ultimate Field Guide and other African mammal field guides.
If you'd like to find out more about how elephants communicate, you should read this in-depth yet fascinating academic paper

Read more: http://www.wildlife-pictures-online.com/elephant-information.html